Comparative Toxicogenomics Database¶
pyctd
only provides methods to download and locally query open accessible
CTD data. We want to pay tribute to the following institutions for their amazing
resource their provide to the scientific community:
- Department of Biological Sciences, North Carolina State University
- Department of Bioinformatics, The Mount Desert Island Biological Laboratory
- Center for Human Health and the Environment, North Carolina State University
About¶
- Citation from CTD website (about) [04/27/2017]:
- “CTD is a robust, publicly available database that aims to advance understanding about how environmental exposures affect human health. It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships. These data are integrated with functional and pathway data to aid in development of hypotheses about the mechanisms underlying environmentally influenced diseases.”
Links¶
Latest CTD publication:
The Comparative Toxicogenomics Database: update 2017; Nucleic Acids Res. 2017 Jan 4; 45(Database issue): D972–D978.; Published online 2016 Sep 19. doi: 10.1093/nar/gkw838; authors: Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Benjamin L. King, Roy McMorran, Jolene Wiegers, Thomas C. Wiegers, and Carolyn J. Mattingly; PubMed Central (PubReader, ePub (beta), PDF )
Link to data: CTD download page
Check the CTD website for more information about data and online tools